Plotting 'networktree' objects — plot.networktree • networktree

Wraps plot.party to plot a tree model with networks on the ends. Networks are plotted with qgraph, and additional arguments are passed there

# S3 method for networktree
plot(
  x,
  terminal_panel = NULL,
  transform = NULL,
  layout = "lock",
  sdbars = FALSE,
  tnex = 3,
  partyargs = list(),
  na.rm = TRUE,
  ...
)

Arguments

x: an object of type 'networktree'
terminal_panel: an optional panel function of the form function(node) plotting the terminal nodes. Alternatively, a panel generating function of class "grapcon_generator" that is called with arguments x and tp_args to set up a panel function. Or, a character choosing one of the implemented standard plots "graph", "box", "matrix" or "bar". The default (NULL) chooses an appropriate panel function depending on the "model" argument.
transform: "cor", "pcor", or "glasso". If set to NULL, transform detected from x
layout: network layout, passed to qgraph. Default "lock" computes spring layout for the full sample and applies this to all graphs
sdbars: if using a barplot, should std deviation error bars be plotted?
tnex: terminal node extension (passed to plot.party). To make the terminal plots bigger, increase this value.
partyargs: additional arguments (list format) passed to partykit::plot.party plotting function that takes partitioned data as input
na.rm: should NA values be removed prior to calculating relevant parameters?
...: additional arguments passed to qgraph or barplot